BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G05SP1|AL425285
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1467 1882 0.0
>3x_Contig1467
Length = 7717
Score = 1882 bits (948), Expect = 0.0
Identities = 966/971 (99%), Gaps = 2/971 (0%)
Strand = Plus / Minus
Query: 1 atggtagattcacaagttcctttacctaaatttggatgccaaaaagtaccgcaaacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5636 atggtagattcacaagttcctttacctaaatttggatgccaaaaagtaccgcaaacttca 5577
Query: 61 tcaccgacactccacgtatctgccaaatttgagcctacttctgagatttttccataatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5576 tcaccgacactccacgtatctgccaaatttgagcctacttctgagatttttccataatac 5517
Query: 121 tctcttccaatgccaacttcatagttcatatgcctagtgtaactattgaatatctttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5516 tctcttccaatgccaacttcatagttcatatgcctagtgtaactattgaatatctttaaa 5457
Query: 181 tcaactgggtttaaaccgacatattccacttgcacggaaatgacatctttagatattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5456 tcaactgggtttaaaccgacatattccacttgcacggaaatgacatctttagatattgga 5397
Query: 241 gtctttatctttgtttcataggagaactgaggaggatgatttttggaatagaatattagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5396 gtctttatctttgtttcataggagaactgaggaggatgatttttggaatagaatattagc 5337
Query: 301 gatttaaccggcacataatggatatgtcttagcggcctagcgactcttttcatctctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5336 gatttaaccggcacataatggatatgtcttagcggcctagcgactcttttcatctctaaa 5277
Query: 361 ggggaagccaattccctagggtttggtgaatcatgattatatttcaccacatatgccaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5276 ggggaagccaattccctagggtttggtgaatcatgattatatttcaccacatatgccaac 5217
Query: 421 ttcggatcgtgttnatttaacaattcttccgccatggtaaaagagttacagcagtatgaa 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5216 ttcggatcgtgtttatttaacaattcttccgccatggtaaaagagttacagcagtatgaa 5157
Query: 481 tttatccagaaaggcttgaagtggtaagcatccttgtgttaagggtcatggtagcggaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5156 tttatccagaaaggcttgaagtggtaagcatccttgtgttaagggtcatggtagcggaag 5097
Query: 541 tctgtgtaaactcc-gttctaattcttttaattgacgctttttttaaatgaaatttagtt 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5096 tctgtgtaaactccggttctaattcttttaattgacgctttttttaaatgaaatttagtt 5037
Query: 600 taatacgagaaacaatagataatacagaaaatgcttaaaacagagaacatatatacgatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5036 taatacgagaaacaatagataatacagaaaatgcttaaaacagagaacatatatacgatc 4977
Query: 660 cggggtatatagtacggacttgtgaacgatatgcatgatgtggtaagaactgaatttaat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4976 cggggtatatagtacggacttgtgaacgatatgcatgatgtggtaagaactgaatttaat 4917
Query: 720 gactgtccagtgcggatggaagtgtgatagtggagcttkccagaggattgataaatcatc 779
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4916 gactgtccagtgcggatggaagtgtgatagtggagcttgccagaggattgataaatcatc 4857
Query: 780 cctagaatgaaattatatacagtgcggtgcttgaagagtggtgagaaaaccataaacaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4856 cctagaatgaaattatatacagtgcggtgcttgaagagtggtgagaaaaccataaacaaa 4797
Query: 840 ctaaaagaacacactctgtataaccatgcaaaactaatgcagataaatgacgagggtgat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4796 ctaaaagaacacactctgtataaccatgcaaaactaatgcagataaatgacgagggtgat 4737
Query: 900 gctgcaaaaatattttacacagctacagcaattttacccggtggtt-cmgatttgcttcc 958
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 4736 gctgcaaaaatattttacacagctacagcaattttacccggtggttccagatttgcttcc 4677
Query: 959 acataatattc 969
|||||||||||
Sbjct: 4676 acataatattc 4666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6916
Number of Sequences: 1807
Number of extensions: 6916
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)